Have you created software deployments as available for your users, but the software isn’t showing up in their Company Portal for Intune? It may be how their PC was joined to Intune. #EnterpriseMobility #EMS
Functionality for available user deployments of .msi and .exe files for Windows 8 / 8.1 depend on the Intune Agent. However, if you have joined a PC via the Company Portal Application instructions, instead of having the full agent, you have joined via an Open Mobile Alliance – Device Management (OMA-DM) method instead of the more fully featured Intune Agent.
So how do you get the agent?
Log into: https://portal.manage.microsoft.com/
Click Add Device in the upper right
Click Download software
Extract the files, making certain that the certificate file is in the same folder as the .exe, then run the executable.
Complete the wizard
Log out and log back into the company portal to see if this has fixed your issue.
Applies to Windows 8, Windows 8.1, Intune, EMS